X-Git-Url: http://git.nguyen.vg/gitweb/?a=blobdiff_plain;f=TextCollectionBuilder.cpp;fp=TextCollectionBuilder.cpp;h=6137406f3fc0e7947f045d82c8f1858035058e6e;hb=89dc22aee980ba16f757cd9a7f77478c2da50051;hp=552abb17eb7ab758bf177f45b7ebf467f83c5ca4;hpb=443151511a86083b21c1c06eb610f86b3aed35be;p=SXSI%2FTextCollection.git diff --git a/TextCollectionBuilder.cpp b/TextCollectionBuilder.cpp index 552abb1..6137406 100644 --- a/TextCollectionBuilder.cpp +++ b/TextCollectionBuilder.cpp @@ -1,146 +1,24 @@ -#include "incbwt/rlcsa_builder.h" -#include "incbwt/bits/deltavector.h" - #include "TextCollectionBuilder.h" -#include "TCImplementation.h" - -using std::string; +#include "FMIndexBuilder.h" +#include "SWCSABuilder.h" namespace SXSI { - -struct TCBuilderRep -{ - unsigned samplerate; - CSA::RLCSABuilder * sa; - - ulong n; - // Total number of texts in the collection - unsigned numberOfTexts; - // Length of the longest text - ulong maxTextLength; - ulong numberOfSamples; - - CSA::DeltaEncoder *notIndexed; // Doc IDs of those texts that are excluded from index. - string niText; // Texts that are not indexed. - -#ifdef TCB_TEST_BWT - DynFMI *dynFMI; -#endif -}; - -/** - * Init text collection - * - */ -TextCollectionBuilder::TextCollectionBuilder(unsigned samplerate, ulong estimatedInputLength) - : p_(new struct TCBuilderRep()) -{ - p_->n = 0; - p_->samplerate = samplerate; - p_->numberOfTexts = 0; - p_->numberOfSamples = 0; - p_->maxTextLength = 0; - p_->notIndexed = new CSA::DeltaEncoder(32); // Block size of 32 - p_->niText = ""; - - // Current params: 8 bytes, no samples, buffer size n/10 bytes. - // Buffer size is always at least 15MB: - if (estimatedInputLength < TEXTCOLLECTION_DEFAULT_INPUT_LENGTH) - estimatedInputLength = TEXTCOLLECTION_DEFAULT_INPUT_LENGTH; - p_->sa = new CSA::RLCSABuilder(8, 0, estimatedInputLength/10); - assert(p_->sa->isOk()); - -#ifdef TCB_TEST_BWT - uchar temp[256]; - for (unsigned i = 0; i < 255; ++i) - temp[i] = i+1; - temp[255] = 0; - p_->dynFMI = new DynFMI(temp, 1, 255, false); -#endif -} - -TextCollectionBuilder::~TextCollectionBuilder() -{ -#ifdef TCB_TEST_BWT - delete p_->dynFMI; -#endif - - delete p_->sa; - delete p_->notIndexed; - delete p_; -} - -void TextCollectionBuilder::InsertText(uchar const * text, bool index) -{ - TextCollection::TextPosition m = std::strlen((char *)text) + 1; - if (m <= 1) - { - // FIXME indexing empty texts - std::cerr << "TextCollectionBuilder::InsertText() error: can not index empty texts!" << std::endl; - exit(1); - } - - p_->numberOfTexts ++; - - if (index) - { - /** - * Insert text into the index - */ - p_->n += m; - p_->numberOfSamples += (m-1)/p_->samplerate; - - if (m > p_->maxTextLength) - p_->maxTextLength = m; // Store length of the longest text seen so far. - - p_->sa->insertSequence((char*)text, m-1, 0); - assert(p_->sa->isOk()); - } - else - { - /** - * Insert text only to TextStorage - */ - p_->notIndexed->setBit(p_->numberOfTexts - 1); - p_->niText.append((const char *)text, m); - } -} - - -TextCollection * TextCollectionBuilder::InitTextCollection(char type) +TextCollectionBuilder* TextCollectionBuilder::create(unsigned samplerate, + index_type_t type, + ulong estimatedInputLength) { - uchar * bwt = 0; - CSA::usint length = 0; - if (p_->numberOfTexts == 0) - { - p_->numberOfTexts ++; // Add one empty text - bwt = new uchar[2]; - bwt[0] = '\0'; - bwt[1] = '\0'; - length = 1; - p_->maxTextLength = 1; - } - else + switch (type) { - bwt = (uchar *)p_->sa->getBWT(length); - delete p_->sa; - p_->sa = 0; - - assert(length == p_->n); + case index_type_default: + return new FMIndexBuilder(samplerate, estimatedInputLength); + break; + case index_type_swcsa: + return new SWCSABuilder(samplerate); + break; } - - p_->notIndexed->setBit(p_->numberOfTexts); // FIXME CSA::DeltaVector can not be all 0's - CSA::DeltaVector deltav = CSA::DeltaVector(*p_->notIndexed, p_->numberOfTexts+1); - delete p_->notIndexed; - p_->notIndexed = 0; - - TextCollection *result = new TCImplementation(bwt, (ulong)length, - p_->samplerate, p_->numberOfTexts, p_->maxTextLength, p_->numberOfSamples, - deltav, p_->niText, type); - - return result; + std::cerr << "TextCollectionBuilder::create(): unknown type given: expecting enum value, type = " << type << std::endl; + std::exit(2); } - -} // namespace SXSI +} // Namespace SXSI