X-Git-Url: http://git.nguyen.vg/gitweb/?a=blobdiff_plain;f=dependencies.mk;h=f7747de7878e52a21decf2e82b75bcdd5680dd81;hb=32cae827732576f372f4af31e9e6eff6ee89070a;hp=29c07af49661e98fe64666d3a97a0cbb4cb42b5c;hpb=eb04a05de55af8957aea1353d21b5e5b98bd1006;p=SXSI%2FTextCollection.git

diff --git a/dependencies.mk b/dependencies.mk
index 29c07af..f7747de 100644
--- a/dependencies.mk
+++ b/dependencies.mk
@@ -1,13 +1,33 @@
-BitRank.o: BitRank.cpp BitRank.h Tools.h
-CSA.o: CSA.cpp CSA.h BitRank.h Tools.h dynFMI.h bittree.h rbtree.h \
-  handle.h pos.h
-TextCollection.o: TextCollection.cpp TextCollection.h Tools.h
+BSGAP.o: BSGAP.cpp BSGAP.h Tools.h BlockArray.h
+BitRank.o: BitRank.cpp BitRank.h BlockArray.h Tools.h
+GapEncode.o: GapEncode.cpp GapEncode.h Tools.h BlockArray.h BSGAP.h
+HeapProfiler.o: HeapProfiler.cpp HeapProfiler.h
+RLWaveletTree.o: RLWaveletTree.cpp RLWaveletTree.h GapEncode.h Tools.h \
+  BlockArray.h BSGAP.h BitRank.h
+TCImplementation.o: TCImplementation.cpp TCImplementation.h BitRank.h \
+  BlockArray.h Tools.h TextCollection.h BSGAP.h
+TextCollection.o: TextCollection.cpp TextCollection.h Tools.h \
+  TCImplementation.h BitRank.h BlockArray.h BSGAP.h
+TextCollectionBuilder.o: TextCollectionBuilder.cpp \
+  TextCollectionBuilder.h TextCollection.h Tools.h incbwt/rlcsa_builder.h \
+  incbwt/rlcsa.h incbwt/bits/vectors.h incbwt/bits/deltavector.h \
+  incbwt/bits/bitvector.h incbwt/bits/../misc/definitions.h \
+  incbwt/bits/bitbuffer.h incbwt/bits/rlevector.h incbwt/sasamples.h \
+  incbwt/misc/definitions.h incbwt/bits/bitbuffer.h \
+  incbwt/bits/deltavector.h incbwt/misc/parameters.h \
+  incbwt/misc/definitions.h TCImplementation.h BitRank.h BlockArray.h \
+  BSGAP.h dynFMI.h bittree.h rbtree.h
 Tools.o: Tools.cpp Tools.h
-bittree.o: bittree.cpp bittree.h rbtree.h
-dynFMI.o: dynFMI.cpp dynFMI.h bittree.h rbtree.h handle.h pos.h
-handle.o: handle.cpp handle.h rbtree.h pos.h
-pos.o: pos.cpp pos.h rbtree.h handle.h
+bittree.o: bittree.cpp bittree.h rbtree.h Tools.h
+dynFMI.o: dynFMI.cpp dynFMI.h bittree.h rbtree.h Tools.h
 rbtree.o: rbtree.cpp rbtree.h
-testTextCollection.o: testTextCollection.cpp CSA.h BitRank.h Tools.h \
-  dynFMI.h bittree.h rbtree.h handle.h pos.h TextCollection.h
-HeapProfiler.o: HeapProfiler.h HeapProfiler.cpp 
\ No newline at end of file
+testTextCollection.o: testTextCollection.cpp TextCollectionBuilder.h \
+  TextCollection.h Tools.h HeapProfiler.h
+testTextCollection2.o: testTextCollection2.cpp TextCollection.h Tools.h \
+  HeapProfiler.h
+testTextCollection3.o: testTextCollection3.cpp TextCollection.h Tools.h
+testTextCollection4.o: testTextCollection4.cpp TCImplementation.h \
+  BitRank.h BlockArray.h Tools.h TextCollection.h BSGAP.h HeapProfiler.h
+testTextCollection5.o: testTextCollection5.cpp HeapProfiler.h \
+  TextCollection.h Tools.h
+timeTextCollection.o: timeTextCollection.cpp TextCollection.h Tools.h