X-Git-Url: http://git.nguyen.vg/gitweb/?a=blobdiff_plain;f=src%2Fstatic_sequence%2Fstatic_sequence_bs.h;fp=src%2Fstatic_sequence%2Fstatic_sequence_bs.h;h=fe023d0a89bc679edffc1946b36c5ca3839cf26c;hb=3fd4bcef236556c7f3bff1d2be8d3f4206245501;hp=0000000000000000000000000000000000000000;hpb=dc7a566a39187bfcea70737cda7278f858cd9842;p=SXSI%2Flibcds.git diff --git a/src/static_sequence/static_sequence_bs.h b/src/static_sequence/static_sequence_bs.h new file mode 100644 index 0000000..fe023d0 --- /dev/null +++ b/src/static_sequence/static_sequence_bs.h @@ -0,0 +1,71 @@ +/* static_sequence.h + * Copyright (C) 2008, Francisco Claude, all rights reserved. + * + * static_sequence definition + * + * This library is free software; you can redistribute it and/or + * modify it under the terms of the GNU Lesser General Public + * License as published by the Free Software Foundation; either + * version 2.1 of the License, or (at your option) any later version. + * + * This library is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * Lesser General Public License for more details. + * + * You should have received a copy of the GNU Lesser General Public + * License along with this library; if not, write to the Free Software + * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA + * + */ + +#ifndef _STATIC_SEQUENCE_BS_H +#define _STATIC_SEQUENCE_BS_H + + +#include +#include +#include + +/** static_sequence represented using one bitmap per symbol, doesn't support efficient access + * + * @author Francisco Claude + */ +class static_sequence_bs : public static_sequence { + +public: + static_sequence_bs(uint * seq, uint n, alphabet_mapper * am, static_bitsequence_builder * bmb); + virtual ~static_sequence_bs(); + + virtual uint rank(uint c, uint i); + + virtual uint select(uint c, uint i); + uint select_next(uint c, uint i); + + virtual uint access(uint i); + + virtual uint size(); + + virtual uint save(FILE * fp); + + /** Reads a bitmap determining the type */ + static static_sequence_bs * load(FILE * fp); + + uint select_next_unsafe(uint c, uint i){ + static_bitsequence * bs = bitmaps[c]; + static_bitsequence_sdarray * sd = reinterpret_cast(bs); + return sd->select_next1_unsafe(i); + }; + +protected: + uint sigma; + static_bitsequence ** bitmaps; + alphabet_mapper * am; + + static_sequence_bs(); + +}; + + +#endif /* _STATIC_SEQUENCE_BS_H */ +