1 /* wt_node_internal.cpp
2 * Copyright (C) 2008, Francisco Claude, all rights reserved.
6 * This library is free software; you can redistribute it and/or
7 * modify it under the terms of the GNU Lesser General Public
8 * License as published by the Free Software Foundation; either
9 * version 2.1 of the License, or (at your option) any later version.
11 * This library is distributed in the hope that it will be useful,
12 * but WITHOUT ANY WARRANTY; without even the implied warranty of
13 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
14 * Lesser General Public License for more details.
16 * You should have received a copy of the GNU Lesser General Public
17 * License along with this library; if not, write to the Free Software
18 * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
22 #include <wt_node_internal.h>
24 wt_node_internal::wt_node_internal(uint * symbols, uint n, uint l, wt_coder * c, static_bitsequence_builder * bmb) {
25 uint * ibitmap = new uint[n/W+1];
26 for(uint i=0;i<n/W+1;i++)
29 if(c->is_set(symbols[i],l))
31 bitmap = bmb->build(ibitmap, n);
33 uint count_right = bitmap->rank1(n-1);
34 uint count_left = n-count_right+1;
35 uint * left = new uint[count_left+1];
36 uint * right = new uint[count_right+1];
37 count_right = count_left = 0;
38 bool match_left = true, match_right = true;
39 for(uint i=0;i<n;i++) {
40 if(bitmap->access(i)) {
41 right[count_right++]=symbols[i];
43 if(right[count_right-1]!=right[count_right-2])
47 left[count_left++]=symbols[i];
49 if(left[count_left-1]!=left[count_left-2])
54 if(match_left/* && c->done(left[0],l+1)*/)
55 left_child = new wt_node_leaf(left[0], count_left);
57 left_child = new wt_node_internal(left, count_left, l+1, c, bmb);
62 if(match_right/* && c->done(right[0],l+1)*/)
63 right_child = new wt_node_leaf(right[0], count_right);
65 right_child = new wt_node_internal(right, count_right, l+1, c, bmb);
73 // Deletes symbols array!
74 wt_node_internal::wt_node_internal(uchar * symbols, uint n, uint l, wt_coder * c, static_bitsequence_builder * bmb) {
75 uint * ibitmap = new uint[n/W+1];
76 for(uint i=0;i<n/W+1;i++)
79 if(c->is_set((uint)symbols[i],l))
81 bitmap = bmb->build(ibitmap, n);
83 uint count_right = bitmap->rank1(n-1);
84 uint count_left = n-count_right+1;
85 uchar * left = new uchar[count_left+1];
86 uchar * right = new uchar[count_right+1];
87 count_right = count_left = 0;
88 bool match_left = true, match_right = true;
89 for(uint i=0;i<n;i++) {
90 if(bitmap->access(i)) {
91 right[count_right++]=symbols[i];
93 if(right[count_right-1]!=right[count_right-2])
97 left[count_left++]=symbols[i];
99 if(left[count_left-1]!=left[count_left-2])
108 if(match_left/* && c->done(left[0],l+1)*/)
110 left_child = new wt_node_leaf((uint)left[0], count_left);
116 left_child = new wt_node_internal(left, count_left, l+1, c, bmb);
117 left = 0; // Already deleted
123 if(match_right/* && c->done(right[0],l+1)*/)
125 right_child = new wt_node_leaf((uint)right[0], count_right);
131 right_child = new wt_node_internal(right, count_right, l+1, c, bmb);
132 right = 0; // Already deleted
137 delete [] left; // already deleted if count_left > 0
141 wt_node_internal::wt_node_internal(uchar * symbols, uint n, uint l, wt_coder * c, static_bitsequence_builder * bmb, uint left, uint *done) {
142 uint * ibitmap = new uint[n/W+1];
143 for(uint i=0;i<n/W+1;i++)
145 for(uint i=0;i<n;i++)
146 if(c->is_set((uint)symbols[i + left],l))
148 bitmap = bmb->build(ibitmap, n);
151 uint count_right = bitmap->rank1(n-1);
152 uint count_left = n-count_right;
153 /* uchar * leftarr = new uchar[count_left+1];
154 uchar * rightarr = new uchar[count_right+1];
155 count_right = count_left = 0;
156 for(uint i=0;i<n;i++) {
157 if(bitmap->access(i)) {
158 rightarr[count_right++]=symbols[i+left];
161 leftarr[count_left++]=symbols[i+left];
166 for (uint i=0;i<n;i++)
167 set_field(done, 1, i+left, 0);
169 for (uint i = 0; i < n; )
172 uchar swap = symbols[j+left];
173 while (!get_field(done, 1, j+left)) { // swapping
175 if (!c->is_set(swap,l))
176 j = bitmap->rank0(k)-1;
178 j = count_left + bitmap->rank1(k)-1;
179 uchar temp = symbols[j+left];
180 symbols[j+left] = swap;
182 set_field(done,1,k+left,1);
185 while (get_field(done,1,i+left))
190 /* for (uint i=0;i<n;i++)
191 if (!bitget(done,i+left))
192 std::cout << "not swapped: " << i << "\n";
193 for (uint i=0;i<count_left;i++)
194 if (leftarr[i] != symbols[i+left]) //c->is_set(symbols[i+left], l))
196 std::cout << symbols[i+left] << " != " << leftarr[i] << " lev = " << l << "\n";
199 for (uint i=count_left;i<n;i++)
200 if (rightarr[i-count_left] != symbols[i+left]) //!c->is_set(symbols[i+left],l))
201 std::cout << symbols[i+left] << " != " << rightarr[i-count_left] << " lev = " << l << "\n";
203 bool match_left = true, match_right = true;
204 for (uint i=1; i < count_left; i++)
205 if (symbols[i+left] != symbols[i+left-1])
207 for (uint i=count_left + 1; i < n; i++)
208 if (symbols[i+left] != symbols[i+left-1])
213 if(match_left/* && c->done(left[0],l+1)*/)
214 left_child = new wt_node_leaf((uint)symbols[left], count_left);
216 left_child = new wt_node_internal(symbols, count_left, l+1, c, bmb, left, done);
221 if(match_right/* && c->done(right[0],l+1)*/)
222 right_child = new wt_node_leaf((uint)symbols[left+count_left], count_right);
224 right_child = new wt_node_internal(symbols, count_right, l+1, c, bmb, left+count_left, done);
231 wt_node_internal::wt_node_internal() { }
233 wt_node_internal::~wt_node_internal() {
235 if(right_child!=NULL) delete right_child;
236 if(left_child!=NULL) delete left_child;
239 uint wt_node_internal::rank(uint symbol, uint pos, uint l, wt_coder * c) {
240 bool is_set = c->is_set(symbol,l);
242 if(left_child==NULL) return 0;
243 return left_child->rank(symbol, bitmap->rank0(pos)-1,l+1,c);
246 if(right_child==NULL) return 0;
247 return right_child->rank(symbol, bitmap->rank1(pos)-1,l+1,c);
251 // return value is rank of symbol (less or equal to the given symbol) that has rank > 0,
252 // the parameter symbol is updated accordinly
253 uint wt_node_internal::rankLessThan(uint &symbol, uint pos)
258 // cout << "pos = " << pos << ", symbol = " << symbol << endl;
262 if(right_child!=NULL)
263 result = right_child->rankLessThan(symbol, bitmap->rank1(pos)-1);
264 if(result == (uint)-1 && left_child!=NULL)
265 return left_child->rankLessThan(symbol, bitmap->rank0(pos)-1);
270 uint wt_node_internal::select(uint symbol, uint pos, uint l, wt_coder * c) {
271 bool is_set = c->is_set(symbol, l);
276 uint new_pos = left_child->select(symbol, pos, l+1,c);
277 if(new_pos+1==0) return (uint)(-1);
278 ret = bitmap->select0(new_pos)+1;
280 if(right_child==NULL)
282 uint new_pos = right_child->select(symbol, pos, l+1,c);
283 if(new_pos+1==0) return (uint)(-1);
284 ret = bitmap->select1(new_pos)+1;
286 if(ret==0) return (uint)-1;
290 uint wt_node_internal::access(uint pos) {
291 bool is_set = bitmap->access(pos);
293 assert(left_child!=NULL);
294 return left_child->access(bitmap->rank0(pos)-1);
296 assert(right_child!=NULL);
297 return right_child->access(bitmap->rank1(pos)-1);
301 // Returns the value at given position and its rank
302 uint wt_node_internal::access(uint pos, uint &rank)
304 // p is the internal node we are pointing our finger at each step
305 wt_node_internal *p = this;
309 bool is_set = p->bitmap->access(pos);
310 // cout << "is_set = " << is_set << ", pos = " << pos << ", rank0 = " << bitmap->rank0(pos) << ", rank1 = " << bitmap->rank1(pos) << endl;
314 pos = p->bitmap->rank0(pos)-1;
315 wt_node_internal *tmp = dynamic_cast<wt_node_internal *>(p->left_child);
320 return p->left_child->access(0);
322 p = tmp; // new internal node
327 pos = p->bitmap->rank1(pos)-1;
328 wt_node_internal *tmp = dynamic_cast<wt_node_internal *>(p->right_child);
333 return p->right_child->access(0);
335 p = tmp; // new internal node
340 void wt_node_internal::access(vector<int> &result, uint i, uint j, uint min, uint max, uint l, uint pivot)
342 uint symbol = pivot | (1 << l);
343 // std::cout << "At l = " << l << ", [" << i << ", " << j << "], [" << min << ", " << max << "], symbol = " << symbol << std::endl;
345 if (j < i || max < min)
353 newi = bitmap->rank0(i - 1);
354 uint newj = bitmap->rank0(j);
356 uint newmax = max < symbol - 1 ? max : symbol - 1;
357 if (left_child != NULL && newj > 0)
358 left_child->access(result, newi, newj-1, min, newmax, l-1, pivot);
366 newi = bitmap->rank1(i - 1);
367 uint newj = bitmap->rank1(j);
369 uint newmin = min > symbol ? min : symbol;
370 if (right_child != NULL && newj > 0)
371 right_child->access(result, newi, newj-1, newmin, max, l-1, symbol);
375 void wt_node_internal::access(vector<int> &result, uint i, uint j)
377 // std::cout << "At l = " << l << ", [" << i << ", " << j << "], [" << min << ", " << max << "], symbol = " << symbol << std::endl;
386 newi = bitmap->rank0(i - 1);
387 uint newj = bitmap->rank0(j);
389 if (left_child != NULL && newj > 0)
390 left_child->access(result, newi, newj-1);
397 newi = bitmap->rank1(i - 1);
398 uint newj = bitmap->rank1(j);
400 if (right_child != NULL && newj > 0)
401 right_child->access(result, newi, newj-1);
406 uint wt_node_internal::access(uint i, uint j, uint min, uint max, uint l, uint pivot)
409 uint symbol = pivot | (1 << l);
410 // std::cout << "At l = " << l << ", [" << i << ", " << j << "], [" << min << ", " << max << "], symbol = " << symbol << std::endl;
412 if (j < i || max < min)
420 newi = bitmap->rank0(i - 1);
421 uint newj = bitmap->rank0(j);
423 uint newmax = max < symbol - 1 ? max : symbol - 1;
424 if (left_child != NULL && newj > 0)
425 count += left_child->access(newi, newj-1, min, newmax, l-1, pivot);
433 newi = bitmap->rank1(i - 1);
434 uint newj = bitmap->rank1(j);
436 uint newmin = min > symbol ? min : symbol;
437 if (right_child != NULL && newj > 0)
438 count += right_child->access(newi, newj-1, newmin, max, l-1, symbol);
444 uint wt_node_internal::size() {
445 uint s = bitmap->size()+sizeof(wt_node_internal);
447 s += left_child->size();
448 if(right_child!=NULL)
449 s += right_child->size();
453 uint wt_node_internal::save(FILE *fp) {
454 uint wr = WT_NODE_INTERNAL_HDR;
455 wr = fwrite(&wr,sizeof(uint),1,fp);
457 if(bitmap->save(fp)) return 1;
458 if(left_child!=NULL) {
459 if(left_child->save(fp)) return 1;
461 wr = WT_NODE_NULL_HDR;
462 wr = fwrite(&wr,sizeof(uint),1,fp);
465 if(right_child!=NULL) {
466 if(right_child->save(fp)) return 1;
468 wr = WT_NODE_NULL_HDR;
469 wr = fwrite(&wr,sizeof(uint),1,fp);
475 wt_node_internal * wt_node_internal::load(FILE *fp) {
477 if(fread(&rd,sizeof(uint),1,fp)!=1) return NULL;
478 if(rd!=WT_NODE_INTERNAL_HDR) return NULL;
479 wt_node_internal * ret = new wt_node_internal();
480 ret->bitmap = static_bitsequence::load(fp);
481 ret->left_child = wt_node::load(fp);
482 ret->right_child = wt_node::load(fp);