+++ /dev/null
-/* alphabet_mapper_cont.cpp
- * Copyright (C) 2008, Francisco Claude, all rights reserved.
- *
- * alphabet_mapper_cont definition
- *
- * This library is free software; you can redistribute it and/or
- * modify it under the terms of the GNU Lesser General Public
- * License as published by the Free Software Foundation; either
- * version 2.1 of the License, or (at your option) any later version.
- *
- * This library is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
- * Lesser General Public License for more details.
- *
- * You should have received a copy of the GNU Lesser General Public
- * License along with this library; if not, write to the Free Software
- * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
- *
- */
-
-#include <alphabet_mapper_cont.h>
-using std::max;
-alphabet_mapper_cont::alphabet_mapper_cont(uint * seq, uint n, static_bitsequence_builder *bmb) {
- uint max_v = 0;
- for(uint i=0;i<n;i++)
- max_v = max(max_v,seq[i]);
- max_v++;
- uint blen = uint_len(max_v,1);
- uint * bmap = new uint[blen];
- for(uint i=0;i<blen;i++)
- bmap[i] = 0;
- for(uint i=0;i<n;i++)
- bitset(bmap,seq[i]);
- m = bmb->build(bmap,max_v);
- delete [] bmap;
-}
-
-alphabet_mapper_cont::alphabet_mapper_cont() {
-}
-
-alphabet_mapper_cont::~alphabet_mapper_cont() {
- delete m;
-}
-
-uint alphabet_mapper_cont::map(uint s) {
- return m->rank1(s);
-}
-
-uint alphabet_mapper_cont::unmap(uint s) {
- return m->select1(s);
-}
-
-uint alphabet_mapper_cont::size() {
- return sizeof(alphabet_mapper_cont)+m->size();
-}
-
-uint alphabet_mapper_cont::save(FILE *fp) {
- uint wr = ALPHABET_MAPPER_CONT_HDR;
- wr = fwrite(&wr,sizeof(uint),1,fp);
- if(wr!=1) return 1;
- if(m->save(fp)) return 1;
- return 0;
-}
-
-alphabet_mapper_cont * alphabet_mapper_cont::load(FILE * fp) {
- uint rd;
- if(fread(&rd,sizeof(uint),1,fp)!=1) return NULL;
- if(rd!=ALPHABET_MAPPER_CONT_HDR) return NULL;
- alphabet_mapper_cont * ret = new alphabet_mapper_cont();
- ret->m = static_bitsequence::load(fp);
- if(ret->m==NULL) {
- delete ret;
- return NULL;
- }
- return ret;
-}