Jouni's Incremental BWT integrated into TextCollection

[SXSI/TextCollection.git] / dependencies.mk

diff --git a/dependencies.mk b/dependencies.mk
index 1cb05db..f7747de 100644 (file)
--- a/dependencies.mk
+++ b/dependencies.mk
@@ -1,19 +1,33 @@
 BSGAP.o: BSGAP.cpp BSGAP.h Tools.h BlockArray.h
 BitRank.o: BitRank.cpp BitRank.h BlockArray.h Tools.h
-CSA.o: CSA.cpp CSA.h dynFMI.h bittree.h rbtree.h Tools.h BitRank.h \
-  BlockArray.h TextCollection.h RLWaveletTree.h GapEncode.h BSGAP.h
 GapEncode.o: GapEncode.cpp GapEncode.h Tools.h BlockArray.h BSGAP.h
 HeapProfiler.o: HeapProfiler.cpp HeapProfiler.h
 RLWaveletTree.o: RLWaveletTree.cpp RLWaveletTree.h GapEncode.h Tools.h \
   BlockArray.h BSGAP.h BitRank.h
-TextCollection.o: TextCollection.cpp TextCollection.h Tools.h CSA.h \
-  dynFMI.h bittree.h rbtree.h BitRank.h BlockArray.h RLWaveletTree.h \
-  GapEncode.h BSGAP.h
+TCImplementation.o: TCImplementation.cpp TCImplementation.h BitRank.h \
+  BlockArray.h Tools.h TextCollection.h BSGAP.h
+TextCollection.o: TextCollection.cpp TextCollection.h Tools.h \
+  TCImplementation.h BitRank.h BlockArray.h BSGAP.h
+TextCollectionBuilder.o: TextCollectionBuilder.cpp \
+  TextCollectionBuilder.h TextCollection.h Tools.h incbwt/rlcsa_builder.h \
+  incbwt/rlcsa.h incbwt/bits/vectors.h incbwt/bits/deltavector.h \
+  incbwt/bits/bitvector.h incbwt/bits/../misc/definitions.h \
+  incbwt/bits/bitbuffer.h incbwt/bits/rlevector.h incbwt/sasamples.h \
+  incbwt/misc/definitions.h incbwt/bits/bitbuffer.h \
+  incbwt/bits/deltavector.h incbwt/misc/parameters.h \
+  incbwt/misc/definitions.h TCImplementation.h BitRank.h BlockArray.h \
+  BSGAP.h dynFMI.h bittree.h rbtree.h
 Tools.o: Tools.cpp Tools.h
 bittree.o: bittree.cpp bittree.h rbtree.h Tools.h
 dynFMI.o: dynFMI.cpp dynFMI.h bittree.h rbtree.h Tools.h
 rbtree.o: rbtree.cpp rbtree.h
-testTextCollection.o: testTextCollection.cpp HeapProfiler.h \
-  TextCollection.h Tools.h
+testTextCollection.o: testTextCollection.cpp TextCollectionBuilder.h \
+  TextCollection.h Tools.h HeapProfiler.h
+testTextCollection2.o: testTextCollection2.cpp TextCollection.h Tools.h \
+  HeapProfiler.h
+testTextCollection3.o: testTextCollection3.cpp TextCollection.h Tools.h
+testTextCollection4.o: testTextCollection4.cpp TCImplementation.h \
+  BitRank.h BlockArray.h Tools.h TextCollection.h BSGAP.h HeapProfiler.h
 testTextCollection5.o: testTextCollection5.cpp HeapProfiler.h \
   TextCollection.h Tools.h
+timeTextCollection.o: timeTextCollection.cpp TextCollection.h Tools.h