Import libcds.

[SXSI/libcds.git] / src / static_sequence / static_sequence_wvtree.cpp

diff --git a/src/static_sequence/static_sequence_wvtree.cpp b/src/static_sequence/static_sequence_wvtree.cpp
new file mode 100644 (file)
index 0000000..ca93594
--- /dev/null
+++ b/src/static_sequence/static_sequence_wvtree.cpp
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+/* static_sequence_wvtree.cpp
+ * Copyright (C) 2008, Francisco Claude, all rights reserved.
+ *
+ * static_sequence_wvtree definition
+ *
+ * This library is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public
+ * License as published by the Free Software Foundation; either
+ * version 2.1 of the License, or (at your option) any later version.
+ *
+ * This library is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with this library; if not, write to the Free Software
+ * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301  USA
+ *
+ */
+ 
+#include <static_sequence_wvtree.h>
+
+static_sequence_wvtree::static_sequence_wvtree(uint * symbols, uint n, wt_coder * c, static_bitsequence_builder * bmb, alphabet_mapper * am) {
+    this->n = n;
+  for(uint i=0;i<n;i++) 
+    symbols[i] = am->map(symbols[i]);
+  this->am = am;
+       am->use();
+  this->c=c;
+       c->use();
+       root = new wt_node_internal(symbols, n, 0, c, bmb);
+  for(uint i=0;i<n;i++) 
+    symbols[i] = am->unmap(symbols[i]);  
+}
+
+static_sequence_wvtree::static_sequence_wvtree(uchar * symbols, uint n, wt_coder * c, static_bitsequence_builder * bmb, alphabet_mapper * am) {
+    this->n = n;
+  for(uint i=0;i<n;i++) 
+    symbols[i] = (uchar)am->map((uint)symbols[i]);
+  this->am = am;
+       am->use();
+  this->c=c;
+       c->use();
+        uint *done = new uint[n/W+1];
+        for (uint i = 0; i < n/W+1; i++)
+            done[i] = 0;
+       root = new wt_node_internal(symbols, n, 0, c, bmb, 0, done);
+        delete [] done;
+        delete [] symbols;
+        symbols = 0; // Already deleted!
+//  for(uint i=0;i<n;i++) 
+//    symbols[i] = (uchar)am->unmap((uint)symbols[i]);  
+}
+
+static_sequence_wvtree::static_sequence_wvtree() {}
+
+static_sequence_wvtree::~static_sequence_wvtree() {
+       delete root;
+       am->unuse();
+  c->unuse(); 
+}
+
+uint static_sequence_wvtree::rank(uint symbol, uint pos) {
+       return root->rank(am->map(symbol), pos, 0, c);
+}
+
+uint static_sequence_wvtree::rankLessThan(uint &symbol, uint pos) {
+    uint s = am->map(symbol);
+//    std::cout << "lessthan..." << std::endl;
+    uint r = root->rankLessThan(s, pos);
+    symbol = am->unmap(s);
+    return r;
+}
+
+
+uint static_sequence_wvtree::count(uint s) {
+  return root->rank(am->map(s), len-1, 0, c);
+}
+
+uint static_sequence_wvtree::select(uint symbol, uint pos) {
+       uint ret = root->select(am->map(symbol), pos, 0, c);
+       if(ret==((uint)-1)) return (uint)-1;
+       return ret-1;
+}
+
+uint static_sequence_wvtree::access(uint pos) {
+       return am->unmap(root->access(pos));
+}
+
+vector<int> static_sequence_wvtree::access(uint i, uint j, uint min, uint max)
+{
+    vector<int> resultSet;
+    root->access(resultSet, i, j, am->map(min), am->map(max), c->depth()-1, 0);
+    for (vector<int>::iterator it = resultSet.begin(); it != resultSet.end(); ++it)
+        *it = am->unmap(*it);
+    return resultSet;
+}
+
+vector<int> static_sequence_wvtree::accessAll(uint i, uint j)
+{
+    vector<int> resultSet;
+    if (j < i)
+        return resultSet;
+
+    // resultSet.reserve(j-i+1); // avoid reallocation
+    root->access(resultSet, i, j);
+    for (vector<int>::iterator it = resultSet.begin(); it != resultSet.end(); ++it)
+        *it = am->unmap(*it);
+    return resultSet;
+}
+
+uint static_sequence_wvtree::count(uint i, uint j, uint min, uint max)
+{
+    return root->access(i, j, am->map(min), am->map(max), c->depth()-1, 0);
+}
+
+
+uint static_sequence_wvtree::size() {
+       /*cout << "WT: " << root->size() << endl;
+       cout << "Coder: " << c->size() << endl;
+       cout << "AM: " << am->size() << endl;*/
+       return sizeof(static_sequence_wvtree)+sizeof(uint)+root->size()+am->size()+c->size();
+}
+
+uint static_sequence_wvtree::save(FILE * fp) { 
+  uint wr = WVTREE_HDR;
+  wr = fwrite(&wr,sizeof(uint),1,fp);
+  if(wr!=1) return 1;
+  wr = fwrite(&n,sizeof(uint),1,fp);
+  if(wr!=1) return 1;
+  if(c->save(fp)) return 1;
+  if(am->save(fp)) return 1;
+  if(root->save(fp)) return 1;
+  return 0;
+}
+
+static_sequence_wvtree * static_sequence_wvtree::load(FILE *fp) {
+  uint rd;
+  if(fread(&rd,sizeof(uint),1,fp)!=1) return NULL;
+  if(rd!=WVTREE_HDR) return NULL;
+  static_sequence_wvtree * ret = new static_sequence_wvtree();
+  if(fread(&ret->n,sizeof(uint),1,fp)!=1) return NULL;
+  ret->c = wt_coder::load(fp);
+       ret->c->use();
+  ret->am = alphabet_mapper::load(fp);
+       ret->am->use();
+  ret->root = wt_node::load(fp);
+  return ret;
+}