Added RLCSA index option
authornvalimak <nvalimak@3cdefd35-fc62-479d-8e8d-bae585ffb9ca>
Sat, 30 Oct 2010 12:59:52 +0000 (12:59 +0000)
committernvalimak <nvalimak@3cdefd35-fc62-479d-8e8d-bae585ffb9ca>
Sat, 30 Oct 2010 12:59:52 +0000 (12:59 +0000)
commit13e254b7c0ee22dffbc7c3125cee0408f9b375da
tree8ce20956ac563c80a8feb4c05e063796254b64a3
parente4b6bdc7cc2a1372e4d4dae50acac55cebcc7e9b
Added RLCSA index option

git-svn-id: svn+ssh://idea.nguyen.vg/svn/sxsi/trunk/TextCollection@927 3cdefd35-fc62-479d-8e8d-bae585ffb9ca
60 files changed:
FMIndex.cpp
FMIndex.h
FMIndexBuilder.cpp
RLCSABuilder.cpp [new file with mode: 0644]
RLCSABuilder.h [new file with mode: 0644]
RLCSAWrapper.h [new file with mode: 0644]
SWCSAWrapper.h
TextCollection.cpp
TextCollectionBuilder.cpp
TextCollectionBuilder.h
TextStorage.cpp
TextStorage.h
dependencies.mk
incbwt/LICENSE [new file with mode: 0644]
incbwt/Makefile
incbwt/README [new file with mode: 0644]
incbwt/bits/array.cpp [new file with mode: 0644]
incbwt/bits/array.h [new file with mode: 0644]
incbwt/bits/bitbuffer.h
incbwt/bits/bitvector.cpp
incbwt/bits/bitvector.h
incbwt/bits/deltavector.cpp
incbwt/bits/deltavector.h
incbwt/bits/nibblevector.cpp [new file with mode: 0644]
incbwt/bits/nibblevector.h [new file with mode: 0644]
incbwt/bits/rlevector.cpp
incbwt/bits/rlevector.h
incbwt/bits/vectors.cpp
incbwt/bits/vectors.h
incbwt/build_plcp.cpp [new file with mode: 0644]
incbwt/build_rlcsa.cpp [new file with mode: 0644]
incbwt/dependencies.mk
incbwt/display_test.cpp [new file with mode: 0644]
incbwt/extract_sequence.cpp [new file with mode: 0644]
incbwt/lcp_test.cpp [new file with mode: 0644]
incbwt/lcpsamples.cpp [new file with mode: 0644]
incbwt/lcpsamples.h [new file with mode: 0644]
incbwt/locate_test.cpp [new file with mode: 0644]
incbwt/misc/definitions.h
incbwt/misc/utils.cpp
incbwt/misc/utils.h
incbwt/parallel_build.cpp [new file with mode: 0644]
incbwt/qsufsort/qsufsort.c
incbwt/qsufsort/qsufsort.h
incbwt/read_bwt.cpp [new file with mode: 0644]
incbwt/rlcsa.cpp
incbwt/rlcsa.h
incbwt/rlcsa_builder.cpp
incbwt/rlcsa_builder.h
incbwt/rlcsa_grep.cpp [new file with mode: 0644]
incbwt/rlcsa_test.cpp [new file with mode: 0644]
incbwt/sample_lcp.cpp [new file with mode: 0644]
incbwt/sasamples.cpp
incbwt/sasamples.h
incbwt/text_generator.cpp [new file with mode: 0644]
incbwt/utils/convert_patterns.cpp [new file with mode: 0644]
incbwt/utils/extract_text.cpp [new file with mode: 0644]
incbwt/utils/split_text.cpp [new file with mode: 0644]
incbwt/utils/split_wikipedia.py [new file with mode: 0755]
makefile