--- /dev/null
+HIDE=@
+CC = g++
+LIBCDSPATH = ../libcds
+CPPFLAGS = -Wall -ansi -g -I$(LIBCDSPATH)/includes/ -O3 -DNDEBUG -Wno-deprecated-declarations
+#CPPFLAGS = -Wall -ansi -g -I$(LIBCDSPATH)/includes/
+LIBCDSA = $(LIBCDSPATH)/lib/libcds.a
+LIBRLCSA = incbwt/rlcsa.a
+LIBLZTRIE = lzindex/lztrie.a
+LIBSWCSA = swcsa/swcsa.a
+LIBS= ${LIBRLCSA} ${LIBCDSA} ${LIBLZTRIE} ${LIBSWCSA}
+
+dcover_obs = dcover/difference_cover.o
+
+TextCollection_obs = TextCollection.o TextCollectionBuilder.o FMIndexBuilder.o RLCSABuilder.o FMIndex.o Tools.o \
+ TextStorage.o Query.o EditDistance.o ResultSet.o
+TCDebug_obs = bittree.o rbtree.o dynFMI.o
+
+TEXTCOLLECTION_A=libTextCollection.a
+
+all: $(TEXTCOLLECTION_A)
+
+testTextCollection: testTextCollection.o $(TextCollection_obs) $(LIBS) $(TCDebug_obs) HeapProfiler.o
+ $(CC) -o testTextCollection testTextCollection.o $(TextCollection_obs) $(LIBS) $(TCDebug_obs) HeapProfiler.o
+
+timeTextCollection: timeTextCollection.o $(TextCollection_obs) $(LIBS) $(TCDebug_obs)
+ $(CC) -o timeTextCollection timeTextCollection.o $(TextCollection_obs) $(TCDebug_obs)
+
+test2dRange: test2dRange.o ${LIBCDSA}
+ $(CC) -o test2dRange test2dRange.o ${LIBCDSA}
+
+incbwt/rlcsa.a:
+ @make -C incbwt
+
+lzindex/lztrie.a:
+ @make -C lzindex
+
+swcsa/swcsa.a:
+ @make -C swcsa
+
+%o: %c
+ @echo [C] $@
+ $(HIDE) (gcc -c $(CPPFLAGS) $< -o $@
+
+%o: %cpp
+ @echo [C++] $@
+ $(HIDE) $(CC) -c $(CPPFLAGS) $< -o $@
+
+
+$(TEXTCOLLECTION_A): $(TextCollection_obs) $(LIBS)
+ @echo [Link] $@
+ $(HIDE) rm -rf .objs
+ $(HIDE) mkdir .objs
+ $(HIDE) (cd .objs; ar x ../${LIBRLCSA};ar x ../${LIBLZTRIE}; ar x ../${LIBSWCSA})
+ $(HIDE) ar rcs $@ $(TextCollection_obs) .objs/*.o
+# $(HIDE) rm -rf .objs
+
+
+clean:
+ @make clean -C incbwt
+ @make clean -C lzindex
+ @make clean -C swcsa
+ rm -f core *.o *~ testTextCollection timeTextCollection dcover/*.o dcover/*~
+
+shallow_clean:
+ rm -f core *.o *~ testTextCollection timeTextCollection
+
+depend:
+ @make depend -C incbwt
+ $(CC) -MM *.cpp > dependencies.mk
+
+include dependencies.mk
+++ /dev/null
-HIDE=@
-CC = g++
-LIBCDSPATH = ../libcds
-CPPFLAGS = -Wall -ansi -g -I$(LIBCDSPATH)/includes/ -O3 -DNDEBUG -Wno-deprecated-declarations
-#CPPFLAGS = -Wall -ansi -g -I$(LIBCDSPATH)/includes/
-LIBCDSA = $(LIBCDSPATH)/lib/libcds.a
-LIBRLCSA = incbwt/rlcsa.a
-LIBLZTRIE = lzindex/lztrie.a
-LIBSWCSA = swcsa/swcsa.a
-LIBS= ${LIBRLCSA} ${LIBCDSA} ${LIBLZTRIE} ${LIBSWCSA}
-
-dcover_obs = dcover/difference_cover.o
-
-TextCollection_obs = TextCollection.o TextCollectionBuilder.o FMIndexBuilder.o RLCSABuilder.o FMIndex.o Tools.o \
- TextStorage.o Query.o EditDistance.o ResultSet.o
-TCDebug_obs = bittree.o rbtree.o dynFMI.o
-
-TEXTCOLLECTION_A=libTextCollection.a
-
-all: $(TEXTCOLLECTION_A)
-
-testTextCollection: testTextCollection.o $(TextCollection_obs) $(LIBS) $(TCDebug_obs) HeapProfiler.o
- $(CC) -o testTextCollection testTextCollection.o $(TextCollection_obs) $(LIBS) $(TCDebug_obs) HeapProfiler.o
-
-timeTextCollection: timeTextCollection.o $(TextCollection_obs) $(LIBS) $(TCDebug_obs)
- $(CC) -o timeTextCollection timeTextCollection.o $(TextCollection_obs) $(TCDebug_obs)
-
-test2dRange: test2dRange.o ${LIBCDSA}
- $(CC) -o test2dRange test2dRange.o ${LIBCDSA}
-
-incbwt/rlcsa.a:
- @make -C incbwt
-
-lzindex/lztrie.a:
- @make -C lzindex
-
-swcsa/swcsa.a:
- @make -C swcsa
-
-%o: %c
- @echo [C] $@
- $(HIDE) (gcc -c $(CPPFLAGS) $< -o $@
-
-%o: %cpp
- @echo [C++] $@
- $(HIDE) $(CC) -c $(CPPFLAGS) $< -o $@
-
-
-$(TEXTCOLLECTION_A): $(TextCollection_obs) $(LIBS)
- @echo [Link] $@
- $(HIDE) rm -rf .objs
- $(HIDE) mkdir .objs
- $(HIDE) (cd .objs; ar x ../${LIBRLCSA};ar x ../${LIBLZTRIE}; ar x ../${LIBSWCSA})
- $(HIDE) ar rcs $@ $(TextCollection_obs) .objs/*.o
-# $(HIDE) rm -rf .objs
-
-
-clean:
- @make clean -C incbwt
- @make clean -C lzindex
- @make clean -C swcsa
- rm -f core *.o *~ testTextCollection timeTextCollection dcover/*.o dcover/*~
-
-shallow_clean:
- rm -f core *.o *~ testTextCollection timeTextCollection
-
-depend:
- @make depend -C incbwt
- $(CC) -MM *.cpp > dependencies.mk
-
-include dependencies.mk